with the map open you can give your squad, or just the soldiers you choose, a string of waypoints by right-clicking on the map and then left-click on move. once they have one waypoint you can add more by holding down the Left Shift key and right-click where you want the next waypoint and then left-click click on Move in the box that pops up.
move your mouse pointer over a waypoint and it will turn into a hand icon and you can adjust the waypoint by dragging and dropping it while holding the left mouse button down. right-click on a waypoint and you can delete it.
also with the map open you can hit the Q key and the option to issue a number of commands will appear. the Q key menu allows you to issue commands remotely to your soldiers.